STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV00122.1Fmn-dependent NADH-azoreductase; COG1182 Acyl carrier protein phosphodiesterase. (203 aa)    
Predicted Functional Partners:
EGV00540.1
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.689
rpsF
Putative 30S ribosomal protein s6; Binds together with S18 to 16S ribosomal RNA.
 
     0.583
EGV00124.1
Hypothetical protein; COG1451 Predicted metal-dependent hydrolase.
       0.533
EGV00123.1
Hypothetical protein.
       0.525
EGV00121.1
COG3957 Phosphoketolase.
       0.488
EGV00169.1
PTS system, lichenan-specific IIA component LicA; COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.480
EGV00327.1
PTS system, lichenan-specific IIA component; COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.451
EGV00145.1
COG1466 DNA polymerase III, delta subunit.
  
     0.420
ackA-2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
      
 0.400
Your Current Organism:
Mycoplasma columbinum
NCBI taxonomy Id: 1037410
Other names: M. columbinum SF7, Mycoplasma columbinum SF7, Mycoplasma columbinum str. SF7, Mycoplasma columbinum strain SF7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.