STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV00135.1Abc transporter permease protein. (412 aa)    
Predicted Functional Partners:
EGV00142.1
Membrane protein.
 
     0.789
EGV00134.1
COG0597 Lipoprotein signal peptidase; Belongs to the peptidase A8 family.
 
     0.767
rpsF
Putative 30S ribosomal protein s6; Binds together with S18 to 16S ribosomal RNA.
  
     0.754
EGV00321.1
spermidine/putrescine/ABC transporter substrate binding protein.
 
    0.724
EGV00419.1
COG1381 Recombinational DNA repair protein (RecF pathway).
 
     0.715
EGV00073.1
Hypothetical protein.
  
     0.703
EGV00074.1
COG5377 Phage-related protein, predicted endonuclease.
  
     0.692
EGV00325.1
ATP-binding protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
 
     0.651
EGV00136.1
DNA processing protein smf; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
       0.648
EGV00266.1
COG0237 Dephospho-CoA kinase.
 
     0.571
Your Current Organism:
Mycoplasma columbinum
NCBI taxonomy Id: 1037410
Other names: M. columbinum SF7, Mycoplasma columbinum SF7, Mycoplasma columbinum str. SF7, Mycoplasma columbinum strain SF7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.