Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGV00048.1 | EGV00254.1 | MCSF7_01271 | MCSF7_02311 | Potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. | COG0515 Serine/threonine protein kinase. | 0.434 |
| EGV00048.1 | deoC | MCSF7_01271 | MCSF7_01196 | Potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.492 |
| EGV00048.1 | nfo | MCSF7_01271 | MCSF7_01856 | Potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.476 |
| EGV00162.1 | nfo | MCSF7_01851 | MCSF7_01856 | COG0260 Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.641 |
| EGV00254.1 | EGV00048.1 | MCSF7_02311 | MCSF7_01271 | COG0515 Serine/threonine protein kinase. | Potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. | 0.434 |
| EGV00254.1 | deoC | MCSF7_02311 | MCSF7_01196 | COG0515 Serine/threonine protein kinase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.654 |
| EGV00254.1 | nfo | MCSF7_02311 | MCSF7_01856 | COG0515 Serine/threonine protein kinase. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.491 |
| EGV00254.1 | recA | MCSF7_02311 | MCSF7_00321 | COG0515 Serine/threonine protein kinase. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.520 |
| EGV00254.1 | topA | MCSF7_02311 | MCSF7_01831 | COG0515 Serine/threonine protein kinase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.538 |
| EGV00291.1 | EGV00316.1 | MCSF7_00759 | MCSF7_00884 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | DNA-damage repair protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | 0.960 |
| EGV00291.1 | deoC | MCSF7_00759 | MCSF7_01196 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.458 |
| EGV00291.1 | mutM | MCSF7_00759 | MCSF7_00834 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.982 |
| EGV00291.1 | nfo | MCSF7_00759 | MCSF7_01856 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.804 |
| EGV00291.1 | recA | MCSF7_00759 | MCSF7_00321 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.999 |
| EGV00291.1 | topA | MCSF7_00759 | MCSF7_01831 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.971 |
| EGV00291.1 | ung | MCSF7_00759 | MCSF7_00601 | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | Uracil-DNA glycosylase (Ung); Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.791 |
| EGV00316.1 | EGV00291.1 | MCSF7_00884 | MCSF7_00759 | DNA-damage repair protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | DNA-directed DNA polymerase; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.960 |
| EGV00316.1 | nfo | MCSF7_00884 | MCSF7_01856 | DNA-damage repair protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.520 |
| EGV00316.1 | recA | MCSF7_00884 | MCSF7_00321 | DNA-damage repair protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.932 |
| EGV00316.1 | topA | MCSF7_00884 | MCSF7_01831 | DNA-damage repair protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.867 |
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