STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV00267.1Hypothetical protein; COG3611 Replication initiation/membrane attachment protein. (320 aa)    
Predicted Functional Partners:
EGV00268.1
Putative primosomal DNA helicase dnai; COG1484 DNA replication protein.
  
  
 0.863
EGV00266.1
COG0237 Dephospho-CoA kinase.
 
    0.755
EGV00419.1
COG1381 Recombinational DNA repair protein (RecF pathway).
  
   
 0.662
EGV00265.1
Hypothetical protein.
       0.647
EGV00580.1
Abc transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.642
EGV00142.1
Membrane protein.
  
     0.587
EGV00546.1
COG1295 Predicted membrane protein.
  
     0.582
EGV00153.1
COG3557 Uncharacterized domain/protein associated with RNAses G and E.
  
     0.549
pheT
phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
     0.540
EGV00276.1
COG0166 Glucose-6-phosphate isomerase; overlaps another CDS with the same product name.
  
     0.527
Your Current Organism:
Mycoplasma columbinum
NCBI taxonomy Id: 1037410
Other names: M. columbinum SF7, Mycoplasma columbinum SF7, Mycoplasma columbinum str. SF7, Mycoplasma columbinum strain SF7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.