STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV00532.1Malate permease. (421 aa)    
Predicted Functional Partners:
EGV00540.1
Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis.
  
     0.627
EGV00484.1
Hypothetical protein.
  
     0.571
EGV00533.1
COG0039 Malate/lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
       0.541
EGV00298.1
Hypothetical protein.
 
     0.503
EGV00566.1
Hypothetical protein.
  
     0.490
EGV00565.1
Cytosine-specific methyltransferase; COG0270 Site-specific DNA methylase.
  
     0.441
EGV00531.1
Hypothetical protein.
       0.439
EGV00119.1
COG0666 FOG: Ankyrin repeat.
   
  0.410
EGV00120.1
Ankyrin repeat-containing protein; COG0666 FOG: Ankyrin repeat.
   
  0.410
Your Current Organism:
Mycoplasma columbinum
NCBI taxonomy Id: 1037410
Other names: M. columbinum SF7, Mycoplasma columbinum SF7, Mycoplasma columbinum str. SF7, Mycoplasma columbinum strain SF7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.