A0A066VB28 protein (Tilletiaria anomala) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

A0A066VB28

Velvet domain-containing protein. (361 aa)

Predicted Functional Partners:

A0A066WPK5

0.757

A0A066WKJ1

0.650

A0A066VIX6

0.641

A0A066VSL7

0.641

A0A066VZ97

0.640

A0A066VBM4

0.636

A0A066VU45

0.636

A0A066VWB0

0.636

A0A066VZB3

0.636

A0A066WNJ7

0.636

Your Current Organism:

Tilletiaria anomala

NCBI taxonomy Id: 1037660
Other names: T. anomala UBC 951, Tilletiaria anomala ATCC 24038, Tilletiaria anomala CBS 436.72, Tilletiaria anomala UBC 951

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A066VB28	A0A066VBM4	Velvet domain-containing protein.	Ribosomal_S10 domain-containing protein.	0.636
A0A066VB28	A0A066VIX6	Velvet domain-containing protein.	Ribosomal protein S5 domain 2-like protein; Belongs to the universal ribosomal protein uS9 family.	0.641
A0A066VB28	A0A066VSL7	Velvet domain-containing protein.	Uncharacterized protein.	0.641
A0A066VB28	A0A066VU45	Velvet domain-containing protein.	Glucocorticoid receptor-like (DNA-binding domain).	0.636
A0A066VB28	A0A066VWB0	Velvet domain-containing protein.	AAA domain-containing protein.	0.636
A0A066VB28	A0A066VZ97	Velvet domain-containing protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.640
A0A066VB28	A0A066VZB3	Velvet domain-containing protein.	MRP-S28 domain-containing protein.	0.636
A0A066VB28	A0A066WKJ1	Velvet domain-containing protein.	Translational machinery component.	0.650
A0A066VB28	A0A066WNJ7	Velvet domain-containing protein.	Uncharacterized protein.	0.636
A0A066VB28	A0A066WPK5	Velvet domain-containing protein.	Uncharacterized protein.	0.757
A0A066VBM4	A0A066VB28	Ribosomal_S10 domain-containing protein.	Velvet domain-containing protein.	0.636
A0A066VBM4	A0A066VIX6	Ribosomal_S10 domain-containing protein.	Ribosomal protein S5 domain 2-like protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A066VBM4	A0A066VSL7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A066VBM4	A0A066VU45	Ribosomal_S10 domain-containing protein.	Glucocorticoid receptor-like (DNA-binding domain).	0.999
A0A066VBM4	A0A066VWB0	Ribosomal_S10 domain-containing protein.	AAA domain-containing protein.	0.999
A0A066VBM4	A0A066VZ97	Ribosomal_S10 domain-containing protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
A0A066VBM4	A0A066VZB3	Ribosomal_S10 domain-containing protein.	MRP-S28 domain-containing protein.	0.999
A0A066VBM4	A0A066WKJ1	Ribosomal_S10 domain-containing protein.	Translational machinery component.	0.999
A0A066VBM4	A0A066WNJ7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A066VIX6	A0A066VB28	Ribosomal protein S5 domain 2-like protein; Belongs to the universal ribosomal protein uS9 family.	Velvet domain-containing protein.	0.641

page 1 of 5

Network Stats

number of nodes:

11

number of edges:

50

average node degree:

9.09

avg. local clustering coefficient:

0.949

expected number of edges:

23

PPI enrichment p-value:

5.72e-07

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006366

Transcription by RNA polymerase II

9 of 91

1.9

4.59

3.78e-13

GO:0001172

Transcription, RNA-templated

3 of 6

2.61

2.5

2.20e-05

GO:0006383

Transcription by RNA polymerase III

3 of 21

2.06

1.71

0.00045

GO:0006360

Transcription by RNA polymerase I

3 of 22

2.04

1.68

0.00049

GO:0045948

Positive regulation of translational initiation

2 of 3

2.73

1.51

0.0018

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003899

DNA-directed 5-3 RNA polymerase activity

5 of 25

2.21

3.28

2.16e-07

GO:0031369

Translation initiation factor binding

2 of 10

2.21

1.04

0.0118

GO:0003677

DNA binding

7 of 602

0.97

0.86

0.00045

GO:0003676

Nucleic acid binding

9 of 1218

0.78

0.68

0.00023

GO:1901363

Heterocyclic compound binding

10 of 2361

0.53

0.41

0.0029

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005665

RNA polymerase II, core complex

9 of 13

2.75

9.83

2.35e-20

GO:0005654

Nucleoplasm

11 of 218

1.61

3.81

7.10e-16

GO:0005736

RNA polymerase I complex

3 of 11

2.34

2.42

2.34e-05

GO:0005666

RNA polymerase III complex

3 of 15

2.21

4.96e-05

GO:0032044

DSIF complex

2 of 2

2.91

1.93

0.00031

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1772

RNA polymerase II, core complex

9 of 11

2.82

10.07

1.54e-20

CL:1776

RNA polymerase II, core complex

6 of 6

2.91

6.89

9.94e-14

CL:1686

DNA-directed RNA polymerase complex, and Regulation of DNA-templated transcription, elongation

11 of 126

1.85

5.37

3.79e-18

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03020

RNA polymerase

9 of 45

2.21

6.85

4.61e-17

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-113418

Formation of the Early Elongation Complex

11 of 32

2.44

10.14

7.67e-24

MAP-6796648

TP53 Regulates Transcription of DNA Repair Genes

11 of 40

2.35

9.43

3.17e-23

MAP-75955

RNA Polymerase II Transcription Elongation

11 of 43

2.32

9.22

4.25e-23

MAP-77075

RNA Pol II CTD phosphorylation and interaction with CE

10 of 30

2.43

9.19

2.51e-21

MAP-72086

mRNA Capping

10 of 32

2.4

9.05

2.90e-21

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0000428

DNA-directed RNA polymerase complex

8 of 85

1.88

4.11

1.61e-11

GOCC:0005665

RNA polymerase II, core complex

4 of 5

2.81

3.99

3.79e-08

GOCC:0055029

Nuclear DNA-directed RNA polymerase complex

5 of 58

1.84

2.6

1.08e-06

GOCC:0005736

RNA polymerase I complex

2 of 5

2.51

1.43

0.0023

GOCC:0005654

Nucleoplasm

5 of 236

1.23

1.11

0.00060

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0804

Transcription

4 of 109

1.47

1.18

0.0018

KW-0240

DNA-directed RNA polymerase

2 of 14

2.06

0.91

0.0192

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