STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A066VCM0RRM domain-containing protein. (345 aa)    
Predicted Functional Partners:
A0A066VKP1
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
   
 0.998
A0A066WGZ8
RRM domain-containing protein.
   
 0.844
A0A066W2Z9
Uncharacterized protein.
   
 0.814
A0A066VIZ6
Uncharacterized protein.
   
 0.800
A0A066WPM3
CID domain-containing protein.
    
 0.792
A0A066WLD8
Uncharacterized protein.
   
 0.765
A0A066VSA8
CPSF_A domain-containing protein.
   
 0.759
A0A066WBS0
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.753
A0A066WNL4
Endoribonuclease YSH1.
   
 0.751
A0A066VIF7
Suf-domain-containing protein.
   
 0.738
Your Current Organism:
Tilletiaria anomala
NCBI taxonomy Id: 1037660
Other names: T. anomala UBC 951, Tilletiaria anomala ATCC 24038, Tilletiaria anomala CBS 436.72, Tilletiaria anomala UBC 951
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