A0A066VDM2 protein (Tilletiaria anomala) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A066VDM2

RNA helicase. (970 aa)

Predicted Functional Partners:

A0A066V9B0

0.952

SPB1

0.937

A0A066WPH7

0.931

A0A066VR40

0.930

A0A066V723

0.929

NOP7

0.927

ERB1

0.924

A0A066VQA6

0.910

A0A066VUD5

0.909

A0A066WA79

0.908

Your Current Organism:

Tilletiaria anomala

NCBI taxonomy Id: 1037660
Other names: T. anomala UBC 951, Tilletiaria anomala ATCC 24038, Tilletiaria anomala CBS 436.72, Tilletiaria anomala UBC 951

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A066V723	A0A066V9B0	A0A066V723	A0A066V9B0	Uncharacterized protein.	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.996
A0A066V723	A0A066VDM2	A0A066V723	A0A066VDM2	Uncharacterized protein.	RNA helicase.	0.929
A0A066V723	A0A066VQA6	A0A066V723	A0A066VQA6	Uncharacterized protein.	RRM domain-containing protein.	0.767
A0A066V723	A0A066VR40	A0A066V723	A0A066VR40	Uncharacterized protein.	Nop14-like protein.	0.999
A0A066V723	A0A066VUD5	A0A066V723	A0A066VUD5	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A066V723	A0A066WA79	A0A066V723	A0A066WA79	Uncharacterized protein.	Noc2-domain-containing protein.	0.991
A0A066V723	A0A066WPH7	A0A066V723	A0A066WPH7	Uncharacterized protein.	WD40 repeat-like protein.	0.986
A0A066V723	ERB1	A0A066V723	A0A066W4Q8	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.939
A0A066V723	NOP7	A0A066V723	A0A066VML2	Uncharacterized protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.932
A0A066V723	SPB1	A0A066V723	A0A066W496	Uncharacterized protein.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.950
A0A066V9B0	A0A066V723	A0A066V9B0	A0A066V723	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.996
A0A066V9B0	A0A066VDM2	A0A066V9B0	A0A066VDM2	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	RNA helicase.	0.952
A0A066V9B0	A0A066VQA6	A0A066V9B0	A0A066VQA6	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	RRM domain-containing protein.	0.894
A0A066V9B0	A0A066VR40	A0A066V9B0	A0A066VR40	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Nop14-like protein.	0.996
A0A066V9B0	A0A066VUD5	A0A066V9B0	A0A066VUD5	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.904
A0A066V9B0	A0A066WA79	A0A066V9B0	A0A066WA79	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Noc2-domain-containing protein.	0.754
A0A066V9B0	A0A066WPH7	A0A066V9B0	A0A066WPH7	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	WD40 repeat-like protein.	0.757
A0A066V9B0	ERB1	A0A066V9B0	A0A066W4Q8	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.878
A0A066V9B0	NOP7	A0A066V9B0	A0A066VML2	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.875
A0A066V9B0	SPB1	A0A066V9B0	A0A066W496	Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.945