STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A066VW73SRP40_C domain-containing protein. (323 aa)    
Predicted Functional Partners:
A0A066WDS0
Nop-domain-containing protein.
   
 
 0.975
A0A066V6V1
Putative rRNA pseudouridine synthase.
   
 
 0.958
A0A066VU02
Fibrillarin.
   
 
 0.957
A0A066VLU2
Ribosomal protein L1.
   
   0.913
A0A066W0R0
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.891
A0A066VF62
CBF-domain-containing protein.
   
   0.852
A0A066WR60
Pseudouridine synthase.
   
 
 0.844
A0A066V910
Uncharacterized protein.
   
    0.843
A0A066VT74
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.841
A0A066WMV0
Brix-domain-containing protein.
   
   0.829
Your Current Organism:
Tilletiaria anomala
NCBI taxonomy Id: 1037660
Other names: T. anomala UBC 951, Tilletiaria anomala ATCC 24038, Tilletiaria anomala CBS 436.72, Tilletiaria anomala UBC 951
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