Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A066V6V1 | A0A066VF62 | Putative rRNA pseudouridine synthase. | CBF-domain-containing protein. | 0.873 |
A0A066V6V1 | A0A066VLU2 | Putative rRNA pseudouridine synthase. | Ribosomal protein L1. | 0.899 |
A0A066V6V1 | A0A066VT74 | Putative rRNA pseudouridine synthase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.632 |
A0A066V6V1 | A0A066VU02 | Putative rRNA pseudouridine synthase. | Fibrillarin. | 0.997 |
A0A066V6V1 | A0A066VW73 | Putative rRNA pseudouridine synthase. | SRP40_C domain-containing protein. | 0.958 |
A0A066V6V1 | A0A066W0R0 | Putative rRNA pseudouridine synthase. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.885 |
A0A066V6V1 | A0A066WDS0 | Putative rRNA pseudouridine synthase. | Nop-domain-containing protein. | 0.995 |
A0A066V6V1 | A0A066WMV0 | Putative rRNA pseudouridine synthase. | Brix-domain-containing protein. | 0.868 |
A0A066V910 | A0A066VF62 | Uncharacterized protein. | CBF-domain-containing protein. | 0.820 |
A0A066V910 | A0A066VLU2 | Uncharacterized protein. | Ribosomal protein L1. | 0.720 |
A0A066V910 | A0A066VT74 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.682 |
A0A066V910 | A0A066VU02 | Uncharacterized protein. | Fibrillarin. | 0.592 |
A0A066V910 | A0A066VW73 | Uncharacterized protein. | SRP40_C domain-containing protein. | 0.843 |
A0A066V910 | A0A066W0R0 | Uncharacterized protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.866 |
A0A066V910 | A0A066WDS0 | Uncharacterized protein. | Nop-domain-containing protein. | 0.634 |
A0A066V910 | A0A066WMV0 | Uncharacterized protein. | Brix-domain-containing protein. | 0.717 |
A0A066VF62 | A0A066V6V1 | CBF-domain-containing protein. | Putative rRNA pseudouridine synthase. | 0.873 |
A0A066VF62 | A0A066V910 | CBF-domain-containing protein. | Uncharacterized protein. | 0.820 |
A0A066VF62 | A0A066VLU2 | CBF-domain-containing protein. | Ribosomal protein L1. | 0.935 |
A0A066VF62 | A0A066VT74 | CBF-domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.903 |
page 1 of 6