STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A066WCZ4Shwachman-Bodian-diamond syndrome protein. (253 aa)    
Predicted Functional Partners:
A0A066W6B0
Putative translation elongation factor 2-putative.
  
 
 0.961
A0A066VME9
Putative RPL43B-60S large subunit ribosomal protein.
  
   0.930
A0A066VYD8
Ubiquitin-domain-containing protein.
   
 
 0.831
A0A066W054
Uncharacterized protein.
   
 
 0.831
A0A066VPZ3
C2H2-type domain-containing protein.
   
 
 0.800
A0A066VYU3
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.793
A0A066W013
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.779
A0A066VYN7
Putative RPS19B-ribosomal protein S19.e, cytosolic.
   
 
 0.768
A0A066WL39
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.749
A0A066WJV2
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.747
Your Current Organism:
Tilletiaria anomala
NCBI taxonomy Id: 1037660
Other names: T. anomala UBC 951, Tilletiaria anomala ATCC 24038, Tilletiaria anomala CBS 436.72, Tilletiaria anomala UBC 951
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