STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM23150.1Inhibitor of KinA. (244 aa)    
Predicted Functional Partners:
SEM23122.1
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
SEM23178.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 0.999
SEL51411.1
Glutamate synthase (NADH) large subunit.
   
 
  0.875
SEM23095.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
    0.829
SEM23067.1
Protein of unknown function.
 
    0.625
SEL82549.1
Amidase.
    
 0.531
SEK84908.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.452
SEL05622.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
 0.440
SEM26010.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
   
 
  0.420
SEM23207.1
Hypothetical protein.
       0.414
Your Current Organism:
Aquimarina amphilecti
NCBI taxonomy Id: 1038014
Other names: A. amphilecti, Aquimarina amphilecti Kennedy et al. 2014, Aquimarina sp. 92V, DSM 25232, NCIMB 14723, strain 92V
Server load: low (16%) [HD]