STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCLT_LOCUS3534Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
TCLT_LOCUS5846
Uncharacterized protein.
    
 0.698
A0A0N5DA35
Uncharacterized protein.
    
 0.665
TCLT_LOCUS3904
RIO domain-containing protein.
    
 0.661
TCLT_LOCUS4887
Uncharacterized protein.
    
 0.650
TCLT_LOCUS660
Bms1-type G domain-containing protein.
    
 0.637
TCLT_LOCUS4729
RING-type domain-containing protein.
    
 0.619
TCLT_LOCUS1862
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.611
TCLT_LOCUS3284
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.608
TCLT_LOCUS2220
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.598
TCLT_LOCUS8951
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.573
Your Current Organism:
Thelazia callipaeda
NCBI taxonomy Id: 103827
Other names: T. callipaeda, eyeworm, thelaziosis nematode
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.