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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCLT_LOCUS4630Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
TCLT_LOCUS4745
ATP synthase subunit gamma.
  
 
 0.901
TCLT_LOCUS546
Uncharacterized protein.
  
 0.899
TCLT_LOCUS6720
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.879
TCLT_LOCUS911
Lyase_1 domain-containing protein.
  
 0.875
TCLT_LOCUS2712
Thymidylate_kin domain-containing protein.
    
 0.834
TCLT_LOCUS4377
Pribosyltran domain-containing protein.
  
 
 0.827
TCLT_LOCUS3887
Uncharacterized protein.
  
 
 0.816
TCLT_LOCUS3885
Uncharacterized protein.
  
 
 0.816
TCLT_LOCUS8831
ATP-cone domain-containing protein.
    
 0.798
TCLT_LOCUS229
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.772
Your Current Organism:
Thelazia callipaeda
NCBI taxonomy Id: 103827
Other names: T. callipaeda, eyeworm, thelaziosis nematode
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