Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKQ53935.1 | cpnA_3 | ACR54_00583 | ACR54_01113 | Hypothetical protein. | Cyclopentanol dehydrogenase. | 0.510 |
AKQ53935.1 | eryA | ACR54_00583 | ACR54_03904 | Hypothetical protein. | Erythronolide synthase, modules 3 and 4. | 0.723 |
AKQ53935.1 | fabG_18 | ACR54_00583 | ACR54_03658 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.510 |
AKQ53935.1 | fabG_6 | ACR54_00583 | ACR54_00992 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.510 |
AKQ54454.1 | AKQ54455.1 | ACR54_01110 | ACR54_01111 | Glyoxalase-like domain protein. | Ureidoglycolate lyase. | 0.733 |
AKQ54454.1 | AKQ54456.1 | ACR54_01110 | ACR54_01112 | Glyoxalase-like domain protein. | Tripartite tricarboxylate transporter family receptor. | 0.569 |
AKQ54454.1 | cpnA_3 | ACR54_01110 | ACR54_01113 | Glyoxalase-like domain protein. | Cyclopentanol dehydrogenase. | 0.625 |
AKQ54454.1 | eryA | ACR54_01110 | ACR54_03904 | Glyoxalase-like domain protein. | Erythronolide synthase, modules 3 and 4. | 0.452 |
AKQ54455.1 | AKQ54454.1 | ACR54_01111 | ACR54_01110 | Ureidoglycolate lyase. | Glyoxalase-like domain protein. | 0.733 |
AKQ54455.1 | AKQ54456.1 | ACR54_01111 | ACR54_01112 | Ureidoglycolate lyase. | Tripartite tricarboxylate transporter family receptor. | 0.650 |
AKQ54455.1 | cpnA_3 | ACR54_01111 | ACR54_01113 | Ureidoglycolate lyase. | Cyclopentanol dehydrogenase. | 0.692 |
AKQ54456.1 | AKQ54454.1 | ACR54_01112 | ACR54_01110 | Tripartite tricarboxylate transporter family receptor. | Glyoxalase-like domain protein. | 0.569 |
AKQ54456.1 | AKQ54455.1 | ACR54_01112 | ACR54_01111 | Tripartite tricarboxylate transporter family receptor. | Ureidoglycolate lyase. | 0.650 |
AKQ54456.1 | cpnA_3 | ACR54_01112 | ACR54_01113 | Tripartite tricarboxylate transporter family receptor. | Cyclopentanol dehydrogenase. | 0.768 |
ascD | cpnA_3 | ACR54_03464 | ACR54_01113 | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase. | Cyclopentanol dehydrogenase. | 0.459 |
ascD | eryA | ACR54_03464 | ACR54_03904 | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase. | Erythronolide synthase, modules 3 and 4. | 0.917 |
ascD | fabG_18 | ACR54_03464 | ACR54_03658 | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.459 |
ascD | fabG_6 | ACR54_03464 | ACR54_00992 | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.459 |
cpnA_3 | AKQ53935.1 | ACR54_01113 | ACR54_00583 | Cyclopentanol dehydrogenase. | Hypothetical protein. | 0.510 |
cpnA_3 | AKQ54454.1 | ACR54_01113 | ACR54_01110 | Cyclopentanol dehydrogenase. | Glyoxalase-like domain protein. | 0.625 |
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