Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKQ54704.1 | AKQ57793.1 | ACR54_01370 | ACR54_04520 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | tRNA modification GTPase TrmE. | 0.534 |
AKQ54704.1 | cmk | ACR54_01370 | ACR54_03082 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.803 |
AKQ54704.1 | der | ACR54_01370 | ACR54_03438 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.534 |
AKQ54704.1 | lspA | ACR54_01370 | ACR54_01907 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.459 |
AKQ54704.1 | murD | ACR54_01370 | ACR54_03943 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.486 |
AKQ54704.1 | rluB | ACR54_01370 | ACR54_01371 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.916 |
AKQ54704.1 | rluF | ACR54_01370 | ACR54_02724 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.634 |
AKQ54704.1 | scpA | ACR54_01370 | ACR54_04169 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.997 |
AKQ54704.1 | smc_2 | ACR54_01370 | ACR54_03355 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.841 |
AKQ54704.1 | topB_1 | ACR54_01370 | ACR54_00567 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | DNA topoisomerase 3. | 0.688 |
AKQ57793.1 | AKQ54704.1 | ACR54_04520 | ACR54_01370 | tRNA modification GTPase TrmE. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.534 |
AKQ57793.1 | cmk | ACR54_04520 | ACR54_03082 | tRNA modification GTPase TrmE. | Cytidylate kinase. | 0.679 |
AKQ57793.1 | rluB | ACR54_04520 | ACR54_01371 | tRNA modification GTPase TrmE. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.521 |
AKQ57793.1 | rluF | ACR54_04520 | ACR54_02724 | tRNA modification GTPase TrmE. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.521 |
cmk | AKQ54704.1 | ACR54_03082 | ACR54_01370 | Cytidylate kinase. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.803 |
cmk | AKQ57793.1 | ACR54_03082 | ACR54_04520 | Cytidylate kinase. | tRNA modification GTPase TrmE. | 0.679 |
cmk | der | ACR54_03082 | ACR54_03438 | Cytidylate kinase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.964 |
cmk | rluB | ACR54_03082 | ACR54_01371 | Cytidylate kinase. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.818 |
cmk | rluF | ACR54_03082 | ACR54_02724 | Cytidylate kinase. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.708 |
cmk | scpA | ACR54_03082 | ACR54_04169 | Cytidylate kinase. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.738 |
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