STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exsAExoenzyme S synthesis regulatory protein ExsA. (268 aa)    
Predicted Functional Partners:
AKQ56073.1
Putative DMT superfamily transporter inner membrane protein.
 
   
 0.712
btr
HTH-type transcriptional activator Btr.
  
     0.691
cdhR_3
HTH-type transcriptional regulator CdhR.
 
 
 0.586
cdhR_4
HTH-type transcriptional regulator CdhR.
 
 
 0.562
cdhR_1
HTH-type transcriptional regulator CdhR.
 
 
 0.527
AKQ56071.1
Patatin-like phospholipase.
       0.508
ripA_1
HTH-type transcriptional repressor of iron proteins A.
  
     0.470
ureR
Urease operon transcriptional activator.
  
     0.465
yesS
HTH-type transcriptional regulator YesS.
  
     0.460
ripA_6
HTH-type transcriptional repressor of iron proteins A.
 
   0.460
Your Current Organism:
Bordetella hinzii
NCBI taxonomy Id: 103855
Other names: ATCC 51783, B. hinzii, CCUG 33847, CIP 104527, DSM 11333, JCM 15550, LMG 13501, LMG:13501, NCTC 13199, strain TC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.