STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bnzABenzene 1,2-dioxygenase subunit alpha. (383 aa)    
Predicted Functional Partners:
alkJ_1
Alcohol dehydrogenase.
    
 0.908
betA
Oxygen-dependent choline dehydrogenase.
    
 0.908
aldA
Putative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
   
 
 0.904
phdK_1
2-formylbenzoate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.904
betB_2
NAD/NADP-dependent betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.904
phdK_2
2-formylbenzoate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.904
plcN_1
Non-hemolytic phospholipase C precursor.
  
 
  0.810
plcN_2
Non-hemolytic phospholipase C precursor.
  
 
  0.810
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.800
bphE
Biphenyl dioxygenase subunit beta.
  
 
 0.793
Your Current Organism:
Bordetella hinzii
NCBI taxonomy Id: 103855
Other names: ATCC 51783, B. hinzii, CCUG 33847, CIP 104527, DSM 11333, JCM 15550, LMG 13501, LMG:13501, NCTC 13199, strain TC58
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