Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKQ56768.1DNA-binding transcriptional regulator HexR. (307 aa)    
Predicted Functional Partners:
bioA_3
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.815
ybbH_2
Putative HTH-type transcriptional regulator YbbH.
 
   
 0.698
AKQ56770.1
NMT1/THI5 like protein.
 
     0.588
AKQ56771.1
DctM-like transporter.
 
     0.520
ohrR_2
Organic hydroperoxide resistance transcriptional regulator.
  
  
 0.481
cph2_2
Phytochrome-like protein cph2.
  
  
 0.451
ectA
L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
 
     0.447
bioA_2
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.435
iaaA
Isoaspartyl peptidase precursor.
  
    0.431
barA
Signal transduction histidine-protein kinase BarA.
  
  
 0.421
Your Current Organism:
Bordetella hinzii
NCBI taxonomy Id: 103855
Other names: ATCC 51783, B. hinzii, CCUG 33847, CIP 104527, DSM 11333, JCM 15550, LMG 13501, LMG:13501, NCTC 13199, strain TC58
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