STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473085_04273Unannotated protein. (467 aa)    
Predicted Functional Partners:
GCA_000473085_01986
Unannotated protein.
  
 
 0.984
GCA_000473085_04272
Unannotated protein.
 
 
 0.965
GCA_000473085_01985
Unannotated protein.
  
 
 0.937
GCA_000473085_04201
Unannotated protein.
   
 0.929
GCA_000473085_01579
Unannotated protein.
     
 0.912
GCA_000473085_00067
Unannotated protein.
    
 0.896
GCA_000473085_01125
Unannotated protein.
   
 
 0.894
GCA_000473085_03880
Unannotated protein.
  
  
 0.883
GCA_000473085_03993
Unannotated protein.
  
 
 0.881
GCA_000473085_01928
Unannotated protein.
  
  
 
0.877
Your Current Organism:
Azorhizobium doebereinerae
NCBI taxonomy Id: 1038858
Other names: A. doebereinerae UFLA1-100, Azorhizobium doebereinerae UFLA1-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.