STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472825_01236Unannotated protein. (417 aa)    
Predicted Functional Partners:
GCA_000472825_00226
Unannotated protein.
    
 0.743
GCA_000472825_01235
Unannotated protein.
     
 0.657
GCA_000472825_01237
Unannotated protein.
       0.618
GCA_000472825_00696
Unannotated protein.
    
 0.576
GCA_000472825_01238
Unannotated protein.
       0.543
GCA_000472825_03671
Unannotated protein.
    
  0.449
Your Current Organism:
Paraburkholderia mimosarum
NCBI taxonomy Id: 1038869
Other names: Burkholderia mimosarum LMG 23256, Burkholderia mimosarum NBRC 106338, P. mimosarum LMG 23256 = NBRC 106338, Paraburkholderia mimosarum LMG 23256, Paraburkholderia mimosarum LMG 23256 = NBRC 106338, Paraburkholderia mimosarum NBRC 106338, Paraburkholderia mimosarum NBRC 106338 = LMG 23256
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.