STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472825_06243Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_000472825_06287
Unannotated protein.
   
 0.987
GCA_000472825_05035
Unannotated protein.
   
 0.914
GCA_000472825_07431
Unannotated protein.
  
 
 0.894
GCA_000472825_03308
Unannotated protein.
    
 0.870
GCA_000472825_06541
Unannotated protein.
    
 0.870
GCA_000472825_04353
Unannotated protein.
  
  
 0.794
GCA_000472825_03936
Unannotated protein.
   
    0.785
GCA_000472825_04769
Unannotated protein.
    
  0.759
GCA_000472825_06343
Unannotated protein.
    
  0.759
GCA_000472825_03970
Unannotated protein.
   
 
 0.757
Your Current Organism:
Paraburkholderia mimosarum
NCBI taxonomy Id: 1038869
Other names: Burkholderia mimosarum LMG 23256, Burkholderia mimosarum NBRC 106338, P. mimosarum LMG 23256 = NBRC 106338, Paraburkholderia mimosarum LMG 23256, Paraburkholderia mimosarum LMG 23256 = NBRC 106338, Paraburkholderia mimosarum NBRC 106338, Paraburkholderia mimosarum NBRC 106338 = LMG 23256
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.