node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APV38004.1 | APV38006.1 | PFAS1_01110 | PFAS1_01120 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
APV38004.1 | APV39634.1 | PFAS1_01110 | PFAS1_09840 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
APV38004.1 | APV41336.1 | PFAS1_01110 | PFAS1_18965 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |
APV38004.1 | crcB | PFAS1_01110 | PFAS1_01105 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.792 |
APV38004.1 | cysG | PFAS1_01110 | PFAS1_01095 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.827 |
APV38004.1 | lepA | PFAS1_01110 | PFAS1_16870 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.455 |
APV38004.1 | lolA | PFAS1_01110 | PFAS1_01115 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.618 |
APV38004.1 | polA | PFAS1_01110 | PFAS1_10715 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.615 |
APV38004.1 | ruvA | PFAS1_01110 | PFAS1_04965 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.510 |
APV38004.1 | serS | PFAS1_01110 | PFAS1_01100 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.779 |
APV38006.1 | APV38004.1 | PFAS1_01120 | PFAS1_01110 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
APV38006.1 | crcB | PFAS1_01120 | PFAS1_01105 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.423 |
APV38006.1 | cysG | PFAS1_01120 | PFAS1_01095 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.529 |
APV38006.1 | lolA | PFAS1_01120 | PFAS1_01115 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.740 |
APV38006.1 | polA | PFAS1_01120 | PFAS1_10715 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.658 |
APV38006.1 | ruvA | PFAS1_01120 | PFAS1_04965 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.587 |
APV38006.1 | serS | PFAS1_01120 | PFAS1_01100 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.455 |
APV39634.1 | APV38004.1 | PFAS1_09840 | PFAS1_01110 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
APV39634.1 | APV41336.1 | PFAS1_09840 | PFAS1_18965 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
APV39634.1 | polA | PFAS1_09840 | PFAS1_10715 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.904 |