Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APV38790.1 | APV38791.1 | PFAS1_05350 | PFAS1_05355 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.930 |
APV38790.1 | argP | PFAS1_05350 | PFAS1_05345 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-beta hydroxysteroid dehydrogenase; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.614 |
APV38791.1 | APV38790.1 | PFAS1_05355 | PFAS1_05350 | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.930 |
APV38791.1 | argP | PFAS1_05355 | PFAS1_05345 | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-beta hydroxysteroid dehydrogenase; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.923 |
argP | APV38790.1 | PFAS1_05345 | PFAS1_05350 | 3-beta hydroxysteroid dehydrogenase; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.614 |
argP | APV38791.1 | PFAS1_05345 | PFAS1_05355 | 3-beta hydroxysteroid dehydrogenase; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.923 |