Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APV38981.1 | APV39273.1 | PFAS1_06360 | PFAS1_07935 | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.688 |
APV38981.1 | APV39405.1 | PFAS1_06360 | PFAS1_08635 | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
APV38981.1 | APV41094.1 | PFAS1_06360 | PFAS1_17675 | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
APV39273.1 | APV38981.1 | PFAS1_07935 | PFAS1_06360 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.688 |
APV39273.1 | APV39405.1 | PFAS1_07935 | PFAS1_08635 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
APV39273.1 | APV41094.1 | PFAS1_07935 | PFAS1_17675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
APV39405.1 | APV38981.1 | PFAS1_08635 | PFAS1_06360 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
APV39405.1 | APV39273.1 | PFAS1_08635 | PFAS1_07935 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
APV39405.1 | APV41094.1 | PFAS1_08635 | PFAS1_17675 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
APV41094.1 | APV38981.1 | PFAS1_17675 | PFAS1_06360 | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
APV41094.1 | APV39273.1 | PFAS1_17675 | PFAS1_07935 | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
APV41094.1 | APV39405.1 | PFAS1_17675 | PFAS1_08635 | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
APV41094.1 | APV41095.1 | PFAS1_17675 | PFAS1_17680 | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.958 |
APV41094.1 | APV42581.1 | PFAS1_17675 | PFAS1_25930 | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
APV41095.1 | APV41094.1 | PFAS1_17680 | PFAS1_17675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.958 |
APV42581.1 | APV41094.1 | PFAS1_25930 | PFAS1_17675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virulence factor family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |