Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APV42415.1Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)    
Predicted Functional Partners:
APV42414.1
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APV42416.1
Nitrate reductase molybdenum cofactor assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
APV42417.1
Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APV42413.1
Nitrate/nitrite transporter; Involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
APV42412.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
APV42418.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.984
APV41642.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
APV37969.1
Nitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.949
APV41639.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.947
APV42867.1
Nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.947
Your Current Organism:
Pseudomonas frederiksbergensis
NCBI taxonomy Id: 104087
Other names: ATCC BAA-257, CIP 106887, DSM 13022, LMG 19851, LMG:19851, P. frederiksbergensis, Pseudomonas frederiksbergensis Andersen et al. 2000, Pseudomonas sp. BDR1P1B1, Pseudomonas sp. BDR1P1B2, Pseudomonas sp. V1D5a, strain JAJ28
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