Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AtDm6_0220 | AtDm6_0347 | Putative FtsX-related transmembrane transport protein. | ABC transporter ATP-binding protein. | 0.694 |
AtDm6_0345 | AtDm6_0346 | Adenylate cyclase. | Putative ABC transport system permease protein. | 0.919 |
AtDm6_0345 | AtDm6_0347 | Adenylate cyclase. | ABC transporter ATP-binding protein. | 0.944 |
AtDm6_0345 | AtDm6_0348 | Adenylate cyclase. | Hypothetical protein. | 0.951 |
AtDm6_0345 | AtDm6_0349 | Adenylate cyclase. | Hypothetical protein. | 0.955 |
AtDm6_0345 | AtDm6_0373 | Adenylate cyclase. | Hypothetical protein. | 0.745 |
AtDm6_0345 | AtDm6_0443 | Adenylate cyclase. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.688 |
AtDm6_0345 | AtDm6_0694 | Adenylate cyclase. | Hypothetical protein. | 0.745 |
AtDm6_0345 | AtDm6_0711 | Adenylate cyclase. | Outer membrane protein H precursor. | 0.715 |
AtDm6_0346 | AtDm6_0345 | Putative ABC transport system permease protein. | Adenylate cyclase. | 0.919 |
AtDm6_0346 | AtDm6_0347 | Putative ABC transport system permease protein. | ABC transporter ATP-binding protein. | 0.920 |
AtDm6_0346 | AtDm6_0348 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.973 |
AtDm6_0346 | AtDm6_0349 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.945 |
AtDm6_0346 | AtDm6_0373 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.710 |
AtDm6_0346 | AtDm6_0443 | Putative ABC transport system permease protein. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.472 |
AtDm6_0346 | AtDm6_0694 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.706 |
AtDm6_0346 | AtDm6_0711 | Putative ABC transport system permease protein. | Outer membrane protein H precursor. | 0.568 |
AtDm6_0347 | AtDm6_0220 | ABC transporter ATP-binding protein. | Putative FtsX-related transmembrane transport protein. | 0.694 |
AtDm6_0347 | AtDm6_0345 | ABC transporter ATP-binding protein. | Adenylate cyclase. | 0.944 |
AtDm6_0347 | AtDm6_0346 | ABC transporter ATP-binding protein. | Putative ABC transport system permease protein. | 0.920 |
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