Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtDm6_1047 | AtDm6_1847 | AtDm6_1047 | AtDm6_1847 | Hypothetical protein. | Hypothetical protein. | 0.548 |
AtDm6_1047 | AtDm6_2383 | AtDm6_1047 | AtDm6_2383 | Hypothetical protein. | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | 0.642 |
AtDm6_1047 | AtDm6_2419 | AtDm6_1047 | AtDm6_2419 | Hypothetical protein. | Hypothetical protein. | 0.405 |
AtDm6_1047 | AtDm6_2493 | AtDm6_1047 | AtDm6_2493 | Hypothetical protein. | Hypothetical protein. | 0.537 |
AtDm6_1047 | AtDm6_3343 | AtDm6_1047 | AtDm6_3343 | Hypothetical protein. | Integral membrane protein, YggT family. | 0.470 |
AtDm6_1047 | AtDm6_3653 | AtDm6_1047 | AtDm6_3653 | Hypothetical protein. | ATP-dependent nuclease subunit B. | 0.575 |
AtDm6_1047 | thrB | AtDm6_1047 | AtDm6_3299 | Hypothetical protein. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.514 |
AtDm6_1847 | AtDm6_1047 | AtDm6_1847 | AtDm6_1047 | Hypothetical protein. | Hypothetical protein. | 0.548 |
AtDm6_1847 | AtDm6_2419 | AtDm6_1847 | AtDm6_2419 | Hypothetical protein. | Hypothetical protein. | 0.444 |
AtDm6_1847 | AtDm6_2493 | AtDm6_1847 | AtDm6_2493 | Hypothetical protein. | Hypothetical protein. | 0.525 |
AtDm6_1847 | AtDm6_3343 | AtDm6_1847 | AtDm6_3343 | Hypothetical protein. | Integral membrane protein, YggT family. | 0.544 |
AtDm6_1847 | AtDm6_3653 | AtDm6_1847 | AtDm6_3653 | Hypothetical protein. | ATP-dependent nuclease subunit B. | 0.718 |
AtDm6_2383 | AtDm6_1047 | AtDm6_2383 | AtDm6_1047 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | Hypothetical protein. | 0.642 |
AtDm6_2383 | AtDm6_2419 | AtDm6_2383 | AtDm6_2419 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | Hypothetical protein. | 0.486 |
AtDm6_2383 | AtDm6_2493 | AtDm6_2383 | AtDm6_2493 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | Hypothetical protein. | 0.571 |
AtDm6_2383 | AtDm6_3343 | AtDm6_2383 | AtDm6_3343 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | Integral membrane protein, YggT family. | 0.590 |
AtDm6_2383 | AtDm6_3653 | AtDm6_2383 | AtDm6_3653 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | ATP-dependent nuclease subunit B. | 0.529 |
AtDm6_2383 | thrB | AtDm6_2383 | AtDm6_3299 | Conserved hypothetical protein, Ubiquinol-cytochrome C chaperone locus. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.571 |
AtDm6_2419 | AtDm6_1047 | AtDm6_2419 | AtDm6_1047 | Hypothetical protein. | Hypothetical protein. | 0.405 |
AtDm6_2419 | AtDm6_1847 | AtDm6_2419 | AtDm6_1847 | Hypothetical protein. | Hypothetical protein. | 0.444 |
page 1 of 3