Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtDm6_1434 | AtDm6_1435 | AtDm6_1434 | AtDm6_1435 | Chaperone protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | Dim6/ntab flavoprotein family. | 0.426 |
AtDm6_1435 | AtDm6_1434 | AtDm6_1435 | AtDm6_1434 | Dim6/ntab flavoprotein family. | Chaperone protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family. | 0.426 |
AtDm6_1435 | BluB | AtDm6_1435 | AtDm6_0940 | Dim6/ntab flavoprotein family. | Cobalamin biosynthesis protein BluB 5,6-dimethylbenzimidazole synthase, flavin destructase family. | 0.545 |
AtDm6_1435 | RibF | AtDm6_1435 | AtDm6_1423 | Dim6/ntab flavoprotein family. | Riboflavin kinase; FMN adenylyltransferase; Belongs to the ribF family. | 0.581 |
AtDm6_1435 | ssuD | AtDm6_1435 | AtDm6_3220 | Dim6/ntab flavoprotein family. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.567 |
BluB | AtDm6_1435 | AtDm6_0940 | AtDm6_1435 | Cobalamin biosynthesis protein BluB 5,6-dimethylbenzimidazole synthase, flavin destructase family. | Dim6/ntab flavoprotein family. | 0.545 |
RibF | AtDm6_1435 | AtDm6_1423 | AtDm6_1435 | Riboflavin kinase; FMN adenylyltransferase; Belongs to the ribF family. | Dim6/ntab flavoprotein family. | 0.581 |
ssuD | AtDm6_1435 | AtDm6_3220 | AtDm6_1435 | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | Dim6/ntab flavoprotein family. | 0.567 |