Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtDm6_2173 | AtDm6_2174 | AtDm6_2173 | AtDm6_2174 | Hypothetical protein. | Hypothetical protein. | 0.480 |
AtDm6_2174 | AtDm6_2173 | AtDm6_2174 | AtDm6_2173 | Hypothetical protein. | Hypothetical protein. | 0.480 |
AtDm6_2174 | AtDm6_2175 | AtDm6_2174 | AtDm6_2175 | Hypothetical protein. | Hypothetical protein. | 0.480 |
AtDm6_2174 | nusG | AtDm6_2174 | AtDm6_2177 | Hypothetical protein. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.474 |
AtDm6_2174 | secE | AtDm6_2174 | AtDm6_2176 | Hypothetical protein. | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.480 |
AtDm6_2175 | AtDm6_2174 | AtDm6_2175 | AtDm6_2174 | Hypothetical protein. | Hypothetical protein. | 0.480 |
AtDm6_2175 | nusG | AtDm6_2175 | AtDm6_2177 | Hypothetical protein. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.762 |
AtDm6_2175 | secE | AtDm6_2175 | AtDm6_2176 | Hypothetical protein. | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.773 |
nusG | AtDm6_2174 | AtDm6_2177 | AtDm6_2174 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Hypothetical protein. | 0.474 |
nusG | AtDm6_2175 | AtDm6_2177 | AtDm6_2175 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Hypothetical protein. | 0.762 |
nusG | secE | AtDm6_2177 | AtDm6_2176 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.985 |
secE | AtDm6_2174 | AtDm6_2176 | AtDm6_2174 | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Hypothetical protein. | 0.480 |
secE | AtDm6_2175 | AtDm6_2176 | AtDm6_2175 | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Hypothetical protein. | 0.773 |
secE | nusG | AtDm6_2176 | AtDm6_2177 | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.985 |