STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhBPutative diheme cytochrome c-553. (471 aa)    
Predicted Functional Partners:
adhA
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent.
  
 
 0.980
AtDm6_0318
Alcohol dehydrogenase.
   
 
 0.911
AtDm6_1153
Alcohol dehydrogenase.
   
 
 0.908
AtDm6_1541
Alcohol dehydrogenase.
   
 
 0.908
adhI
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.902
AtDm6_1948
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent.
  
 
  0.901
AtDm6_1964
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent.
  
 
  0.901
AtDm6_0936
Alpha-keto-acid decarboxylase.
     
 0.900
AtDm6_0604
Gluconate 2-dehydrogenase, membrane-bound, flavoprotein.
 
 
 0.835
AtDm6_0605
Gluconate 2-dehydrogenase, membrane-bound, gamma subunit.
 
  
 0.791
Your Current Organism:
Acetobacter tropicalis
NCBI taxonomy Id: 104102
Other names: A. tropicalis, Acetobacter tropicalis Lisdiyanti et al. 2001, IFO 16470, JCM 10947, LMG 19825, LMG:19825, NBRC 16470, NRIC 0312, strain Ni-6b
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