Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AtDm6_0353 | AtDm6_0443 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.692 |
AtDm6_0353 | AtDm6_2406 | Hypothetical protein. | Hypothetical protein. | 0.620 |
AtDm6_0353 | AtDm6_2486 | Hypothetical protein. | Hypothetical protein. | 0.450 |
AtDm6_0353 | AtDm6_2988 | Hypothetical protein. | Hypothetical protein. | 0.730 |
AtDm6_0353 | AtDm6_3583 | Hypothetical protein. | Hypothetical protein. | 0.618 |
AtDm6_0443 | AtDm6_0353 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.692 |
AtDm6_0443 | AtDm6_2406 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.586 |
AtDm6_0443 | AtDm6_2486 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.549 |
AtDm6_0443 | AtDm6_2988 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.710 |
AtDm6_0443 | AtDm6_3583 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.750 |
AtDm6_0748 | AtDm6_1952 | Cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.564 |
AtDm6_0748 | AtDm6_2406 | Cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.563 |
AtDm6_0748 | AtDm6_2486 | Cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.439 |
AtDm6_1648 | AtDm6_1649 | RND-type multidrug efflux pump, outer membrane protein. | RND-type multidrug efflux pump, membrane permease. | 0.962 |
AtDm6_1648 | AtDm6_2406 | RND-type multidrug efflux pump, outer membrane protein. | Hypothetical protein. | 0.572 |
AtDm6_1648 | AtDm6_2486 | RND-type multidrug efflux pump, outer membrane protein. | Hypothetical protein. | 0.497 |
AtDm6_1648 | AtDm6_3242 | RND-type multidrug efflux pump, outer membrane protein. | Hypothetical protein. | 0.688 |
AtDm6_1649 | AtDm6_1648 | RND-type multidrug efflux pump, membrane permease. | RND-type multidrug efflux pump, outer membrane protein. | 0.962 |
AtDm6_1649 | AtDm6_2406 | RND-type multidrug efflux pump, membrane permease. | Hypothetical protein. | 0.578 |
AtDm6_1649 | AtDm6_2486 | RND-type multidrug efflux pump, membrane permease. | Hypothetical protein. | 0.523 |
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