Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtDm6_2107 | AtDm6_2108 | AtDm6_2107 | AtDm6_2108 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.981 |
AtDm6_2107 | AtDm6_2909 | AtDm6_2107 | AtDm6_2909 | Aspartate aminotransferase. | Aromatic-L-amino-acid decarboxylase. | 0.910 |
AtDm6_2107 | AtDm6_2995 | AtDm6_2107 | AtDm6_2995 | Aspartate aminotransferase. | Prephenate dehydratase. | 0.976 |
AtDm6_2107 | AtDm6_3565 | AtDm6_2107 | AtDm6_3565 | Aspartate aminotransferase. | Cyclohexadienyl dehydrogenase. | 0.904 |
AtDm6_2107 | hisC | AtDm6_2107 | AtDm6_0520 | Aspartate aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.910 |
AtDm6_2108 | AtDm6_2107 | AtDm6_2108 | AtDm6_2107 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.981 |
AtDm6_2108 | AtDm6_2909 | AtDm6_2108 | AtDm6_2909 | Aspartate aminotransferase. | Aromatic-L-amino-acid decarboxylase. | 0.910 |
AtDm6_2108 | AtDm6_2995 | AtDm6_2108 | AtDm6_2995 | Aspartate aminotransferase. | Prephenate dehydratase. | 0.979 |
AtDm6_2108 | AtDm6_3565 | AtDm6_2108 | AtDm6_3565 | Aspartate aminotransferase. | Cyclohexadienyl dehydrogenase. | 0.904 |
AtDm6_2108 | hisC | AtDm6_2108 | AtDm6_0520 | Aspartate aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.917 |
AtDm6_2858 | AtDm6_2995 | AtDm6_2858 | AtDm6_2995 | Chorismate mutase I. | Prephenate dehydratase. | 0.932 |
AtDm6_2858 | AtDm6_3565 | AtDm6_2858 | AtDm6_3565 | Chorismate mutase I. | Cyclohexadienyl dehydrogenase. | 0.938 |
AtDm6_2858 | aroA | AtDm6_2858 | AtDm6_1112 | Chorismate mutase I. | 5-Enolpyruvylshikimate-3-phosphate synthase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.838 |
AtDm6_2858 | aroB | AtDm6_2858 | AtDm6_1367 | Chorismate mutase I. | Shikimate kinase I; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.704 |
AtDm6_2909 | AtDm6_2107 | AtDm6_2909 | AtDm6_2107 | Aromatic-L-amino-acid decarboxylase. | Aspartate aminotransferase. | 0.910 |
AtDm6_2909 | AtDm6_2108 | AtDm6_2909 | AtDm6_2108 | Aromatic-L-amino-acid decarboxylase. | Aspartate aminotransferase. | 0.910 |
AtDm6_2909 | AtDm6_2995 | AtDm6_2909 | AtDm6_2995 | Aromatic-L-amino-acid decarboxylase. | Prephenate dehydratase. | 0.806 |
AtDm6_2909 | AtDm6_3565 | AtDm6_2909 | AtDm6_3565 | Aromatic-L-amino-acid decarboxylase. | Cyclohexadienyl dehydrogenase. | 0.802 |
AtDm6_2909 | hisC | AtDm6_2909 | AtDm6_0520 | Aromatic-L-amino-acid decarboxylase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.901 |
AtDm6_2995 | AtDm6_2107 | AtDm6_2995 | AtDm6_2107 | Prephenate dehydratase. | Aspartate aminotransferase. | 0.976 |
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