Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtDm6_1237 | AtDm6_3614 | AtDm6_1237 | AtDm6_3614 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.535 |
AtDm6_1237 | AtDm6_3616 | AtDm6_1237 | AtDm6_3616 | 2-methylcitrate dehydratase. | Transcriptional regulator, XRE family. | 0.474 |
AtDm6_1237 | prpB | AtDm6_1237 | AtDm6_3613 | 2-methylcitrate dehydratase. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.868 |
AtDm6_3614 | AtDm6_1237 | AtDm6_3614 | AtDm6_1237 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.535 |
AtDm6_3614 | AtDm6_3615 | AtDm6_3614 | AtDm6_3615 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.974 |
AtDm6_3614 | AtDm6_3616 | AtDm6_3614 | AtDm6_3616 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | Transcriptional regulator, XRE family. | 0.428 |
AtDm6_3614 | prpB | AtDm6_3614 | AtDm6_3613 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.955 |
AtDm6_3615 | AtDm6_3614 | AtDm6_3615 | AtDm6_3614 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.974 |
AtDm6_3615 | AtDm6_3616 | AtDm6_3615 | AtDm6_3616 | 2-methylcitrate dehydratase. | Transcriptional regulator, XRE family. | 0.744 |
AtDm6_3615 | prpB | AtDm6_3615 | AtDm6_3613 | 2-methylcitrate dehydratase. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.937 |
AtDm6_3616 | AtDm6_1237 | AtDm6_3616 | AtDm6_1237 | Transcriptional regulator, XRE family. | 2-methylcitrate dehydratase. | 0.474 |
AtDm6_3616 | AtDm6_3614 | AtDm6_3616 | AtDm6_3614 | Transcriptional regulator, XRE family. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.428 |
AtDm6_3616 | AtDm6_3615 | AtDm6_3616 | AtDm6_3615 | Transcriptional regulator, XRE family. | 2-methylcitrate dehydratase. | 0.744 |
AtDm6_3616 | prpB | AtDm6_3616 | AtDm6_3613 | Transcriptional regulator, XRE family. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.420 |
prpB | AtDm6_1237 | AtDm6_3613 | AtDm6_1237 | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 2-methylcitrate dehydratase. | 0.868 |
prpB | AtDm6_3614 | AtDm6_3613 | AtDm6_3614 | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.955 |
prpB | AtDm6_3615 | AtDm6_3613 | AtDm6_3615 | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 2-methylcitrate dehydratase. | 0.937 |
prpB | AtDm6_3616 | AtDm6_3613 | AtDm6_3616 | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | Transcriptional regulator, XRE family. | 0.420 |