STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtDm6_3651Two component repsonse/transcriptional regulator. (252 aa)    
Predicted Functional Partners:
nuoC-2
NADH-ubiquinone oxidoreductase chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.912
cvgSY
Sensory box histidine kinase/response regulator.
 
 0.901
AtDm6_0963
Two-component hybrid sensor and regulator.
 
 0.843
AtDm6_0029
Phosphate regulon sensor protein PhoR (SphS).
 
 0.812
AtDm6_0385
Sensor histidine kinase.
 
 0.808
AtDm6_2221
Hypothetical protein.
 
 0.790
AtDm6_0148
Putative two component sensor histidine kinase.
 
 
 0.769
AtDm6_0066
Sensor histidine kinase ChvG.
 
 
 0.666
AtDm6_2385
Osmolarity sensor protein EnvZ.
 
 
 0.607
AtDm6_1590
Two component sensor kinase.
 
 
 0.562
Your Current Organism:
Acetobacter tropicalis
NCBI taxonomy Id: 104102
Other names: A. tropicalis, Acetobacter tropicalis Lisdiyanti et al. 2001, IFO 16470, JCM 10947, LMG 19825, LMG:19825, NBRC 16470, NRIC 0312, strain Ni-6b
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