STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379605_00399Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000379605_00556
Unannotated protein.
    
   0.843
GCA_000379605_06409
Unannotated protein.
    
  0.752
GCA_000379605_00398
Unannotated protein.
       0.471
GCA_000379605_04246
Unannotated protein.
    
  0.467
GCA_000379605_00400
Unannotated protein.
       0.448
GCA_000379605_06450
Unannotated protein.
  
 
   0.416
GCA_000379605_00951
Unannotated protein.
  
     0.409
GCA_000379605_05726
Unannotated protein.
  
     0.402
Your Current Organism:
Rhizobium giardinii
NCBI taxonomy Id: 1041139
Other names: Pararhizobium giardinii bv. giardinii H152, R. giardinii bv. giardinii H152, Rhizobium giardinii bv. giardinii H152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.