STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379605_04024Unannotated protein. (410 aa)    
Predicted Functional Partners:
GCA_000379605_04407
Unannotated protein.
  
  0.864
GCA_000379605_04408
Unannotated protein.
  
  0.856
GCA_000379605_02591
Unannotated protein.
  
  0.816
GCA_000379605_04856
Unannotated protein.
  
  
  0.803
GCA_000379605_02590
Unannotated protein.
 
  0.781
GCA_000379605_00688
Unannotated protein.
  
  0.778
GCA_000379605_05587
Unannotated protein.
 
  0.767
GCA_000379605_05572
Unannotated protein.
  
  0.763
GCA_000379605_00689
Unannotated protein.
 
   0.753
GCA_000379605_04025
Unannotated protein.
   
   0.749
Your Current Organism:
Rhizobium giardinii
NCBI taxonomy Id: 1041139
Other names: Pararhizobium giardinii bv. giardinii H152, R. giardinii bv. giardinii H152, Rhizobium giardinii bv. giardinii H152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.