STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379605_06506Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_000379605_01346
Unannotated protein.
  
 0.978
GCA_000379605_01735
Unannotated protein.
  
 0.978
GCA_000379605_04109
Unannotated protein.
  
 0.973
GCA_000379605_04913
Unannotated protein.
  
 0.973
GCA_000379605_03124
Unannotated protein.
   
 0.969
GCA_000379605_06509
Unannotated protein.
   
 0.969
GCA_000379605_02505
Unannotated protein.
  
 
 0.898
GCA_000379605_04643
Unannotated protein.
  
 
 0.882
GCA_000379605_01315
Unannotated protein.
  
 
 0.849
GCA_000379605_01621
Unannotated protein.
  
 
 0.849
Your Current Organism:
Rhizobium giardinii
NCBI taxonomy Id: 1041139
Other names: Pararhizobium giardinii bv. giardinii H152, R. giardinii bv. giardinii H152, Rhizobium giardinii bv. giardinii H152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.