STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426285_01760Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000426285_00405
Unannotated protein.
  
  
 0.817
GCA_000426285_03075
Unannotated protein.
  
  
 0.817
GCA_000426285_03960
Unannotated protein.
  
  
 0.817
GCA_000426285_05148
Unannotated protein.
   
    0.712
GCA_000426285_05091
Unannotated protein.
   
    0.613
GCA_000426285_03020
Unannotated protein.
    
  0.520
GCA_000426285_01761
Unannotated protein.
       0.489
GCA_000426285_01687
Unannotated protein.
  
    0.466
GCA_000426285_02597
Unannotated protein.
 
     0.464
GCA_000426285_04269
Unannotated protein.
 
   
 0.421
Your Current Organism:
Rhizobium leucaenae
NCBI taxonomy Id: 1041147
Other names: R. leucaenae USDA 9039, Rhizobium leucaenae CFN 299, Rhizobium leucaenae LMG 9517, Rhizobium leucaenae USDA 9039, Rhizobium tropici USDA 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.