STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCOL_V204025Unannotated protein. (216 aa)    
Predicted Functional Partners:
MCOL_V213395
Unannotated protein.
  
     0.653
MCOL_V201095
Unannotated protein.
  
     0.606
MCOL_V221966
Unannotated protein.
  
     0.601
MCOL_V226332
Unannotated protein.
  
     0.574
MCOL_V210460
Unannotated protein.
  
 
   0.569
MCOL_V204030
Unannotated protein; Belongs to the cytochrome P450 family.
       0.557
MCOL_V213220
Unannotated protein.
  
     0.540
MCOL_V201620
Unannotated protein.
  
     0.473
MCOL_V218428
Unannotated protein; Belongs to the long-chain O-acyltransferase family.
  
     0.461
MCOL_V225782
Unannotated protein.
  
     0.460
Your Current Organism:
Mycobacterium colombiense
NCBI taxonomy Id: 1041522
Other names: M. colombiense CECT 3035, Mycobacterium colombiense 10B, Mycobacterium colombiense CECT 3035, Mycobacterium colombiense CIP 108962, Mycobacterium colombiense DSM 45105, Mycobacterium colombiense str. CECT 3035, Mycobacterium colombiense strain CECT 3035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.