STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCOL_V226127Unannotated protein. (138 aa)    
Predicted Functional Partners:
MCOL_V226132
Unannotated protein.
       0.794
MCOL_V203170
Unannotated protein.
 
     0.707
MCOL_V220731
Unannotated protein.
 
     0.691
MCOL_V222076
Unannotated protein.
  
     0.688
MCOL_V205560
Unannotated protein.
  
     0.684
MCOL_V205865
Unannotated protein; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S).
  
     0.672
MCOL_V207380
Unannotated protein.
  
     0.671
MCOL_V202650
Unannotated protein.
  
     0.664
MCOL_V211225
Unannotated protein.
  
     0.650
MCOL_V201600
Unannotated protein.
  
     0.644
Your Current Organism:
Mycobacterium colombiense
NCBI taxonomy Id: 1041522
Other names: M. colombiense CECT 3035, Mycobacterium colombiense 10B, Mycobacterium colombiense CECT 3035, Mycobacterium colombiense CIP 108962, Mycobacterium colombiense DSM 45105, Mycobacterium colombiense str. CECT 3035, Mycobacterium colombiense strain CECT 3035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.