STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCOL_V202470Unannotated protein. (217 aa)    
Predicted Functional Partners:
MCOL_V200615
Unannotated protein.
     0.875
MCOL_V210040
Unannotated protein.
 
     0.856
MCOL_V200610
Unannotated protein.
 
   
 0.812
MCOL_V200620
Unannotated protein.
 
     0.811
MCOL_V200635
Unannotated protein.
 
     0.785
MCOL_V202465
Unannotated protein.
       0.675
MCOL_V210035
Unannotated protein.
 
     0.661
MCOL_V202460
Unannotated protein; Belongs to the long-chain O-acyltransferase family.
       0.630
MCOL_V224887
Unannotated protein.
  
     0.462
MCOL_V210335
Unannotated protein.
  
     0.447
Your Current Organism:
Mycobacterium colombiense
NCBI taxonomy Id: 1041522
Other names: M. colombiense CECT 3035, Mycobacterium colombiense 10B, Mycobacterium colombiense CECT 3035, Mycobacterium colombiense CIP 108962, Mycobacterium colombiense DSM 45105, Mycobacterium colombiense str. CECT 3035, Mycobacterium colombiense strain CECT 3035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.