STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW86759.1PKD domain-containing protein; COG3291 FOG: PKD repeat. (356 aa)    
Predicted Functional Partners:
AEW86757.1
Hypothetical protein.
 
     0.922
AEW86756.1
Hypothetical protein.
 
     0.919
AEW86761.1
Hypothetical protein.
 
     0.903
AEW86755.1
Hypothetical protein.
 
     0.875
AEW86762.1
Hypothetical protein.
 
     0.872
AEW86754.1
Hypothetical protein.
 
     0.864
AEW86751.1
GPW/gp25 family protein.
 
     0.861
AEW86750.1
Hypothetical protein.
 
     0.856
AEW86760.1
NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.827
AEW86758.1
ATPase; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
 
    0.790
Your Current Organism:
Flavobacterium columnare
NCBI taxonomy Id: 1041826
Other names: F. columnare ATCC 49512, Flavobacterium columnare ATCC 49512, Flavobacterium columnare str. ATCC 49512, Flavobacterium columnare strain ATCC 49512
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.