STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mtc_1245Major Facilitator Superfamily. (410 aa)    
Predicted Functional Partners:
Mtc_1246
Major Facilitator Superfamily.
 
    
0.627
Mtc_1244
Major Facilitator Superfamily.
 
    
0.574
Mtc_1260
Hypothetical protein.
  
     0.464
Mtc_0476
Hypothetical protein.
  
  
 0.462
Mtc_1941
Putative RNA-binding protein of the translin family.
 
     0.429
Mtc_1473
Putative arylsulfatase A and related enzyme.
 
   
 0.413
Mtc_1675
ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
     0.410
Mtc_1247
Protein of unknown function (DUF1328); Belongs to the UPF0391 family.
       0.404
Your Current Organism:
Methanocella conradii
NCBI taxonomy Id: 1041930
Other names: M. conradii HZ254, Methanocella conradii HZ254, Methanocella conradii str. HZ254, Methanocella conradii strain HZ254, Methanocella sp. HZ254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.