STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000218745_00312Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000218745_00474
Unannotated protein.
  
 
 0.902
GCA_000218745_00313
Unannotated protein.
 
     0.848
GCA_000218745_01575
Unannotated protein.
  
 
 0.842
GCA_000218745_01158
Unannotated protein.
  
 
 0.825
GCA_000218745_01317
Unannotated protein.
 
 
0.772
GCA_000218745_01462
Unannotated protein.
 
 
 0.752
GCA_000218745_00152
Unannotated protein.
   
 
 0.730
GCA_000218745_01455
Unannotated protein.
  
 
 0.706
GCA_000218745_01181
Unannotated protein.
    
 0.696
GCA_000218745_00599
Unannotated protein.
    
 0.687
Your Current Organism:
Prochlorococcus marinus HNLC2
NCBI taxonomy Id: 1041939
Other names: P. marinus bv. HNLC2, Prochlorococcus marinus biovar HNLC2, Prochlorococcus marinus bv. HNLC2, Prochlorococcus marinus ecotype HNLC2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.