STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UgpBSugar-binding periplasmic protein/domains. (471 aa)    
Predicted Functional Partners:
BAK47894.1
Transcriptional regulator.
  
 0.961
BAK47893.1
Hypothetical protein.
  
 0.957
BAK47896.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
 0.955
UgpB-2
Sugar-binding periplasmic protein/domains.
  
  
  0.923
UgpB-3
Sugar-binding periplasmic protein/domains.
  
  
 
0.906
BAK47892.1
Hypothetical protein.
     
  0.900
LytS
Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.801
BAK47419.1
Hypothetical protein.
 
  
 0.694
PutP-3
Na+/proline, Na+/panthothenate symporter; Related permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.679
CitT
Di- and tricarboxylate transporter.
  
    0.638
Your Current Organism:
Clostridium sp. SY8519
NCBI taxonomy Id: 1042156
Other names: C. sp. SY8519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.