STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_00188Aldo_ket_red domain-containing protein. (355 aa)    
Predicted Functional Partners:
PMG11_04452
RanBD1 domain-containing protein.
    
  0.822
PMG11_09244
Putative Aminotransferase.
   
 
  0.548
PMG11_05504
Uncharacterized protein.
   
 0.541
PMG11_03541
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.536
PMG11_05475
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.529
PMG11_05050
Abhydrolase_3 domain-containing protein.
   
 
  0.516
PMG11_00240
Putative Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
    
 0.502
PMG11_01403
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.498
PMG11_05858
Uncharacterized protein.
    
  0.497
PMG11_05884
Ribosomal protein L37; Binds to the 23S rRNA.
    
  0.497
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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