STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_00185Putative Related to GLY1-L-threonine aldolase, low-specific. (396 aa)    
Predicted Functional Partners:
PMG11_05764
Putative Catalytic activity: threonine synthase.
   
 0.892
PMG11_02244
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.883
PMG11_09447
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.883
PMG11_09244
Putative Aminotransferase.
    
 0.882
PMG11_10012
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.879
PMG11_09147
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
     
 0.847
PEBR_29938
Putative Pyridoxal-phosphate dependent enzyme.
   
 
 0.841
ILV1
Threonine dehydratase.
   
 
 0.757
PMG11_11354
Putative Threonine dehydratase.
   
 
 0.757
PMG11_09693
Putative VrtJ.
  
  
 
0.718
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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