STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_00196Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
swd1
Putative WD40 repeat protein.
    
 0.896
PMG11_09934
B30.2/SPRY domain-containing protein.
    
 0.888
PMG11_00869
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.876
PMG11_00150
Putative Transcriptional corepressor Cyc8.
    
 0.844
PMG11_04452
RanBD1 domain-containing protein.
    
 0.844
PMG11_03064
Putative Histone H3.
    
 0.766
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.766
PMG11_10645
Uncharacterized protein.
    
 0.730
PMG11_06686
CPSF_A domain-containing protein.
    
 0.725
ubl1
Ubiquitin-like protein 1.
    
  0.711
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.