STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMG11_01053Putative Eukaryotic peptide chain release factor subunit 1. (494 aa)    
Predicted Functional Partners:
PMG11_05198
Putative Polypeptide release factor 3.
   
 0.999
PMG11_07615
Putative Translation initiation factor rli1.
   
 
 0.996
PMG11_00764
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.986
rps0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.943
PMG11_00326
Putative 60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.939
PMG11_00611
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.936
rps23
Putative 40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.929
PEBR_12132
Putative Methionyl aminopeptidase.
   
   0.926
RPS2
Putative 40S ribosomal protein S2/30S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.921
PMG11_04653
Putative FGB1.
   
   0.915
Your Current Organism:
Penicillium brasilianum
NCBI taxonomy Id: 104259
Other names: ATCC 12072, CBS 253.55, FRR 3466, P. brasilianum, Penicillium sp. 028M, Penicillium sp. FKI-3368, QM 6947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.