Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PMG11_02244 | PMG11_02987 | A0A0F7TJE5 | A0A0F7VE91 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.964 |
PMG11_02244 | PMG11_03600 | A0A0F7TJE5 | A0A0F7VG09 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.973 |
PMG11_02244 | PMG11_05962 | A0A0F7TJE5 | A0A0F7TQJ1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative C1 tetrahydrofolate ligase. | 0.973 |
PMG11_02244 | PMG11_07552 | A0A0F7TJE5 | A0A0F7TQ89 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.978 |
PMG11_02244 | PMG11_07972 | A0A0F7TJE5 | A0A0F7TRK5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative Bifunctional purine biosynthesis protein. | 0.986 |
PMG11_02244 | PMG11_09244 | A0A0F7TJE5 | A0A0F7TVJ6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative Aminotransferase. | 0.961 |
PMG11_02244 | PMG11_10012 | A0A0F7TJE5 | A0A0F7TXU1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.985 |
PMG11_02244 | PMG11_11361 | A0A0F7TJE5 | A0A0F7U3L2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative Methylenetetrahydrofolate dehydrogenase. | 0.962 |
PMG11_02244 | ade5 | A0A0F7TJE5 | A0A0F7U0A0 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative Phosphoribosylglycinamide formyltransferase. | 0.966 |
PMG11_02244 | mtd1 | A0A0F7TJE5 | A0A0F7TRW8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Methylenetetrahydrofolate dehydrogenase [NAD(+)]. | 0.962 |
PMG11_02987 | PMG11_02244 | A0A0F7VE91 | A0A0F7TJE5 | Uncharacterized protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.964 |
PMG11_02987 | PMG11_03600 | A0A0F7VE91 | A0A0F7VG09 | Uncharacterized protein. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.861 |
PMG11_02987 | PMG11_05962 | A0A0F7VE91 | A0A0F7TQJ1 | Uncharacterized protein. | Putative C1 tetrahydrofolate ligase. | 0.934 |
PMG11_02987 | PMG11_07552 | A0A0F7VE91 | A0A0F7TQ89 | Uncharacterized protein. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.971 |
PMG11_02987 | PMG11_07972 | A0A0F7VE91 | A0A0F7TRK5 | Uncharacterized protein. | Putative Bifunctional purine biosynthesis protein. | 0.863 |
PMG11_02987 | PMG11_10012 | A0A0F7VE91 | A0A0F7TXU1 | Uncharacterized protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.893 |
PMG11_02987 | ade5 | A0A0F7VE91 | A0A0F7U0A0 | Uncharacterized protein. | Putative Phosphoribosylglycinamide formyltransferase. | 0.941 |
PMG11_02987 | mtd1 | A0A0F7VE91 | A0A0F7TRW8 | Uncharacterized protein. | Methylenetetrahydrofolate dehydrogenase [NAD(+)]. | 0.865 |
PMG11_03600 | PMG11_02244 | A0A0F7VG09 | A0A0F7TJE5 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.973 |
PMG11_03600 | PMG11_02987 | A0A0F7VG09 | A0A0F7VE91 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Uncharacterized protein. | 0.861 |
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